Insertion junction: CLIP2.020001_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.020001
Chromosome:chromosome 5
Location:1028950
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g247450 CGL56,RDP5 Putative rhodanese-like protein; (1 of 1) PTHR34209//PTHR34209:SF1 - FAMILY NOT NAMED // RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTAAGGGACAGAAACACGCGGGCGGCAGTAGCTGGGCAGTTGCTGGGCA
Internal bar code:CTATGTGTGTAGTGACACACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1532
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCAGCTATCACCCCACCT
Suggested primer 2:GACAGCGTTTCCTGAGTCCA