Insertion junction: CLIP2.020005_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.020005
Chromosome:chromosome 17
Location:1420356
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g706300 XPD1,RAD3C (1 of 1) K10844 - DNA excision repair protein ERCC-2 (ERCC2, XPD); RAD3/XP-D family DNA-binding helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTGTATCCGTGCTTTTCCAAAACGGTGCTAACCCACACGTGTCTCCACA
Internal bar code:GCGATGTAAAGCGATATAACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:561
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TGACCACGGTCTGGAACTTG
Suggested primer 2:AGGTGTTTCTGACGGAGCTG