Insertion junction: CLIP2.020009_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.020009
Chromosome:chromosome 9
Location:3596092
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396735 (1 of 1) PTHR18895:SF3 - METHYLTRANSFERASE-LIKE PROTEIN 20 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCGCTGGCACCAACGGCGTCTCGCCGCCGCCCGCGGAGATTGAGGCCA
Internal bar code:ACATTTCGAACAGTAGAGGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1867
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTGATGGATGTTGGCAGT
Suggested primer 2:CGGCAGGCATTTAATTCCGG