Insertion junction: CLIP2.020011_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.020011
Chromosome:chromosome 3
Location:276901
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144404 (1 of 14) PF03133 - Tubulin-tyrosine ligase family (TTL) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACACACACACACACACACACACACACACACACACGCACACGCACACGC
Internal bar code:CTGCTTCAGCTCTAGCACTGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:201
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCCAAGTGTTGTCGTGTG
Suggested primer 2:GCTAGAGGTGGATCACTCGC