Insertion junction: CLIP2.020022_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.020022
Chromosome:chromosome 13
Location:5174382
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g607350 CAH7 (1 of 2) PTHR11002:SF13 - BETA CARBONIC ANHYDRASE 1; Carbonic anhydrase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGCTGGCTACAGCTGCAAACAGCGGGGGCAGGCAGCAGCGGGTGGAGC
Internal bar code:TTTTAAAGATAATCACATTCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:628
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGCAGGCAGGTTTTAGGA
Suggested primer 2:CTGTACCAAGACCCAGCCAG