Insertion junction: CLIP2.020025_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.020025
Chromosome:chromosome 12
Location:9832298
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g546452 GT90F45,GT90-45 (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90); GT90 family protein 45 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCGGGCTCTGCCCCCCCACCGGCCCCCCTCCGCGCAGGCATCTCCTGC
Internal bar code:GAGCGTTGGCACTATTCGCTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2050
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CCAATGCTATTCCGTGCTGC
Suggested primer 2:TTTGGCACGTGCGTACAATG