Insertion junction: CLIP2.020025_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.020025
Chromosome:chromosome 12
Location:9832311
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g546452 GT90F45,GT90-45 (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90); GT90 family protein 45 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGATGGGGGCAAGGGGGTTTGGTGAGTTGGGATGATAGGCACGACGAG
Internal bar code:GAGCGTTGGCACTATTCGCTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:521
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGGCACGTGCGTACAATG
Suggested primer 2:CCAATGCTATTCCGTGCTGC