Insertion junction: CLIP2.020026_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.020026
Chromosome:chromosome 12
Location:5093053
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g526559 (1 of 6) IPR000719//IPR002290//IPR011009//IPR020636 - Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Calcium/calmodulin-dependent/calcium-dependent protein kinase CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGCGGAAGACCTTGCTGCCATCAGGCGCGATGTCGTATAGCAGGTTGG
Internal bar code:CCATTCACGTTTAATGCTTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2521
LEAP-Seq percent confirming:79.0698
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTGCATCCTCCACAACTC
Suggested primer 2:CCGTCAAGTGCAATACCCCT