Insertion junction: CLIP2.020027_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.020027
Chromosome:chromosome 16
Location:443994
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g693200 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTACTCGCCCCCCTACCCCCCACCCGCCGCCGCCACACCCCCATCGTA
Internal bar code:GTGATTGACCTGCTCGGGTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:188
LEAP-Seq percent confirming:37.5
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAACTGGTAGCAGCCAAC
Suggested primer 2:GCAGAATCATCAGCGTGCTG