Insertion junction: CLIP2.020028_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.020028
Chromosome:chromosome 3
Location:331738
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144564 MMP13 Matrix metalloproteinase; (1 of 1) IPR008752//IPR024079 - Peptidase M11, gametolysin // Metallopeptidase, catalytic domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTGGTGCTGCGTGTGGTGCTGCGTGTGGTGCTGCGTGTGGTGCGGCT
Internal bar code:TAACAAGACGATTGTAGGCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1376
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GCACATATCCACACACCCCA
Suggested primer 2:GGTTGTAGCCACGTTGCAAG