Insertion junction: CLIP2.020029_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.020029
Chromosome:chromosome 7
Location:3820970
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g338602 POLH1 (1 of 1) PTHR11076//PTHR11076:SF11 - DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBER // DNA POLYMERASE ETA; DNA polymerase eta subunit intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTATAAAGCACGTTACCTTCGGTATGTGAGCAGCATATGTTCAAGCATT
Internal bar code:TCCATTTGGTACTGAAATAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:2235
LEAP-Seq percent confirming:92.5
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTGTATGCATTTCCACCG
Suggested primer 2:TGTGTGTGTGTGTGTGACGA