Insertion junction: CLIP2.020032_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.020032
Chromosome:chromosome 12
Location:7441068
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g557000 ATG12,APG12 Autophagy-related protein; (1 of 1) K08336 - ubiquitin-like protein ATG12 (ATG12) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCGCGGGTTTCTGCAGACTCTGGGCCCAGCTCCTGCCCCAAACGTCGC
Internal bar code:ATTCATTAGCTTAGGTTTTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:511
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTGCCCTCTATCCCGTAC
Suggested primer 2:GGCTTGCAGGGGAAGTTTTG