Insertion junction: CLIP2.020040_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.020040
Chromosome:chromosome 15
Location:1169586
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g639134 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGCCTGTGGTGATGACAACGGCACGAGGGAATGGCGGGCCTGCAGCAG
Internal bar code:TTGGAAACATTTCTCTCTTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3119
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:110
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:110

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGTCAATCCATGCCACCT
Suggested primer 2:AAGGTGGACTGCTATTGGCC