Insertion junction: CLIP2.020043_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.020043
Chromosome:chromosome 3
Location:2271006
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g157600 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATGGCGGCAAGGATGTCGTGCCGCAGTCTCTACAGCTGGTTGAAGAGC
Internal bar code:GGAGATCTATAGGATAAGCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3703
LEAP-Seq percent confirming:99.5
LEAP-Seq n confirming:199
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:200

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGCCCATACTACCCGTGA
Suggested primer 2:GCGCTTTGTTGTGTGTGCTA