Insertion junction: CLIP2.020048_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.020048
Chromosome:chromosome 5
Location:1005665
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre05.g247250 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTCAGTCCGCAGTTCCGCACGTCAAGCAGGAAGGACGAGCTTGCAACT
Internal bar code:TGTTGGAAGGTTCCTTCGGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1075
LEAP-Seq percent confirming:22.2222
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ACATCCGTCATCCTCCTCCA
Suggested primer 2:CTCCCTGTTGCAGTTCCTGT