Insertion junction: CLIP2.020050_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.020050
Chromosome:chromosome 12
Location:5752478
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g532500 (1 of 2) K03453 - bile acid:Na+ symporter, BASS family (TC.BASS); Sodium:bile acid symporter intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTCATCATGTGCGGGAGTAGGCGCCAGCACGTTACACGCTGCTCCGAA
Internal bar code:ACTGCTATATTTAAAGGTTGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1628
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCTACTCGCAAAGCAGTT
Suggested primer 2:ACTGCTTGGTGAAGACGGAG