Insertion junction: CLIP2.020055_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.020055
Chromosome:chromosome 6
Location:8130728
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g305700 (1 of 14) IPR010998 - Integrase, Lambda-type, N-terminal intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCACCCACCCGCAGCATGACCTGCAGCTCCTCGACGCCCTTGATGTCT
Internal bar code:GAGTCTGGTCACTTTTTCGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3015
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CAATGATGTGCGGATGCCAG
Suggested primer 2:CCGCCAAGTCCTGTTTGTTG