Insertion junction: CLIP2.020055_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.020055
Chromosome:chromosome 6
Location:8130736
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g305700 (1 of 14) IPR010998 - Integrase, Lambda-type, N-terminal intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCTTGATCCTTTTAATAGAGTCGCTTATGTCGTGCATGGATCGCGCGT
Internal bar code:AAGGTGAAATCATGCGAACCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3888
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:82
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCCAAGTCCTGTTTGTTG
Suggested primer 2:CAATGATGTGCGGATGCCAG