Insertion junction: CLIP2.020060_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.020060
Chromosome:chromosome 16
Location:6682381
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g673250 NRR1 (1 of 19) PTHR31251:SF1 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED; Nitrogen Response Regulator 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGTATCGGGAGATGACATAATGCAGTGCGCGCGTGGTTGTGGCCACAC
Internal bar code:GGGTTGTTTATCTCGTATGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:975
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TATTCCTGCCAACCAGCGAG
Suggested primer 2:AGTCTAGACAGGGTGGTGCA