Insertion junction: CLIP2.020061_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.020061
Chromosome:chromosome 3
Location:8511065
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800401 (1 of 2) PF05139 - Erythromycin esterase (Erythro_esteras) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCACGGATACTAAAGTGCACCTGTGCTGGCTCCACATGCATCTGTAAC
Internal bar code:TTAAGTAGCTATTGTAGCCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:483
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGTGTGTGCATGTGTGTG
Suggested primer 2:GGGTTAATGGGGGCCATGAA