Insertion junction: CLIP2.020072_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.020072
Chromosome:chromosome 5
Location:210391
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00047317

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAAACCCTGCGTCTGTCCTTCCTCTGCCCTTGACAATCCCGCATCGTCT
Internal bar code:GCAGAAGCCCTATGTTGGTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3242
LEAP-Seq percent confirming:87.1795
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGGAATACGCCAGCAATG
Suggested primer 2:CGGCTGAGACTTGTGTCACT