Insertion junction: CLIP2.020079_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.020079
Chromosome:chromosome 12
Location:2640881
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g505800 MSC6,MSCL2,CAM16 (1 of 2) IPR002048//IPR006685//IPR010920 - EF-hand domain // Mechanosensitive ion channel MscS // LSM domain; Predicted protein with mechanosensitive ion channel domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGTCTATGGTTTCCGGTGTTGCCGCGCCGCTGGCGACTCCTGCCAACGC
Internal bar code:GCTAACGTAAGTATTTTTGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:178
LEAP-Seq percent confirming:54.5455
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GTACTCGGGGTCCAGGTAGT
Suggested primer 2:CACACACACACACAAGCTCG