Insertion junction: CLIP2.020080_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.020080
Chromosome:chromosome 16
Location:1141847
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g650050 (1 of 2) PTHR12231//PTHR12231:SF112 - CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN // RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGCATGTGGCACAGCCTGCCACGAATTGCGGCATCAGCGCGGCAGCGC
Internal bar code:ATATGTGGGACCGTCAATTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1511
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GATGCGTGACTATCCTGCGA
Suggested primer 2:GCGCACACATCATTCCCATC