Insertion junction: CLIP2.020082_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.020082
Chromosome:chromosome 1
Location:7456760
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g800135 (1 of 1) PTHR30217//PTHR30217:SF10 - UNCHARACTERIZED PROTEASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGTGTATTGTGTGGGAGACCGGAGTAAGGGACTAAGGGAAAGGCACATG
Internal bar code:CTTCAGTCTTTTTGGACGGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:795
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:ACACCTGCTGTCTACTTCGC
Suggested primer 2:ACTGGGGAGCGTTCTTCTTG