Insertion junction: CLIP2.020088_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.020088
Chromosome:chromosome 1
Location:3661260
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g023773 (1 of 6) IPR000253//IPR008984 - Forkhead-associated (FHA) domain // SMAD/FHA domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCGGGGCTGCTTCCGGCCACCATGCCCTGCGGGCACCAGGCGCATTCG
Internal bar code:TGTGTCTCTTGTCTGCAAGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:530
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:AAGTCTCGGAGTCGGAAGGA
Suggested primer 2:CTATGCGTTTACAGTGCGGC