Insertion junction: CLIP2.020095_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.020095
Chromosome:chromosome 3
Location:2659417
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g160700 (1 of 2) IPR000679//IPR013088 - Zinc finger, GATA-type // Zinc finger, NHR/GATA-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTATTCCCGTATTCCAGGCAGCGAATCACAAAGCCTGGGCCCCCGTTCA
Internal bar code:TATGATATTTCTCGGTTCATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4791
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:TTTTGTGGAAATGGCGCTGG
Suggested primer 2:CCTTCCTTACTAGAGCGCCG