Insertion junction: CLIP2.020096_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.020096
Chromosome:chromosome 5
Location:1885296
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g235850 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGGCGGAGGCGTCGGGCGCGGCGGCCGACACGTCCTGCAGTCGCACC
Internal bar code:AAAGCTAGGACATAAGGCTAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2681
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCCTCTTCCTCGGCTGTG
Suggested primer 2:GTTTCCGGCACTCTTGGGTA