Insertion junction: CLIP2.020113_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.020113
Chromosome:chromosome 17
Location:161922
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g696950 (1 of 2) IPR000719//IPR001229//IPR001245//IPR002290//IPR011009//IPR016187//IPR020635 - Protein kinase domain // Jacalin-like lectin domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // C-type lectin fold // Tyrosine-protein kinase, catalytic domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGCTGGAGCCTGGCGGATGGCGAGGCGGTGGGGTCCTTCAGCCCGCC
Internal bar code:ATGAGTTCGGGTCCTCAAATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2088
LEAP-Seq percent confirming:88.5714
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:AAACCCATCTGCCCATCAGG
Suggested primer 2:TTTCGCTACGCTGAACCAGT