Insertion junction: CLIP2.020114_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.020114
Chromosome:chromosome 3
Location:8615266
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g210513 (1 of 2) K05894 - 12-oxophytodienoic acid reductase (OPR) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTTGCTCGCAAGCGCAGCTCTCGGGCTGTTCCGCTTCCAGTCGGCCCCA
Internal bar code:GATCTTTATCAACGCACACGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2890
LEAP-Seq percent confirming:86.1111
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGGCCATAAGAAACTTCG
Suggested primer 2:TGCCAGTGATGACCATTCCC