Insertion junction: CLIP2.020120_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.020120
Chromosome:chromosome 11
Location:3818792
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g479383 (1 of 1) IPR000104//IPR013122 - Antifreeze protein, type I // Polycystin cation channel, PKD1/PKD2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGGGGCTGGGTTGGGCTTGGGTTTGGGTAGACGGCTTGCTACCCAACG
Internal bar code:GCTTCGAATGACTCAGAGAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:6097
LEAP-Seq percent confirming:17.0732
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:68
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGGTGGAAGGGTCAGTGC
Suggested primer 2:TGGCTTAATGCACCGGGATT