Insertion junction: CLIP2.020120_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.020120
Chromosome:chromosome 11
Location:3818793
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g479383 (1 of 1) IPR000104//IPR013122 - Antifreeze protein, type I // Polycystin cation channel, PKD1/PKD2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTAGTCATGTGCGTATGAACGGTGACGCGTCAGAACTTACGCTGCGTA
Internal bar code:AACAATCGTAGCGCCCTTGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4112
LEAP-Seq percent confirming:7.47664
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:99
LEAP-Seq n unique pos:107

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCTTAATGCACCGGGATT
Suggested primer 2:GTAGGTGGAAGGGTCAGTGC