Insertion junction: CLIP2.020124_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.020124
Chromosome:chromosome 15
Location:867213
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g640250 (1 of 1) K07562 - nonsense-mediated mRNA decay protein 3 (NMD3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGAGTTTGTTGTGTCCGCATGCCCATAGTGCCCAGGGTGCGGGCGAGC
Internal bar code:TTCTGTAACCGGTAGCGAATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:618
LEAP-Seq percent confirming:89.4737
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGGCAATGCATGTACTCG
Suggested primer 2:GTTAGGTGGGATGGTGGTGG