Insertion junction: CLIP2.020128_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.020128
Chromosome:chromosome 13
Location:1199121
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g569900 (1 of 100) IPR001810 - F-box domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCACAGCTGTAGCTGCTGCTACTGCCGCTACCACTACTACTGCCACCAG
Internal bar code:AGGTTTGTATCTCAAGGCGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1833
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGGACGCATTCCATCACA
Suggested primer 2:GCTTGCGTGTCAAAAGAGCA