Insertion junction: CLIP2.020129_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.020129
Chromosome:chromosome 1
Location:3775840
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g024650 CTL1 carbohydrate-binding protein; (1 of 2) PF00059//PF07714//PF14295 - Lectin C-type domain (Lectin_C) // Protein tyrosine kinase (Pkinase_Tyr) // PAN domain (PAN_4) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGACGCCCAGTGGGCCCGGGCCACGTGCGTTAAGGCTGTGCGGCTGGT
Internal bar code:ACGAATTAAGCCACGAATGAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1801
LEAP-Seq percent confirming:88.5714
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGAGGTGTTGAGCTGCTG
Suggested primer 2:GGCTCTGACTTGATGTGGCT