Insertion junction: CLIP2.020144_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.020144
Chromosome:chromosome 16
Location:516422
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g692751 PDI3 Protein disulfide isomerase 3; (1 of 1) K13984 - thioredoxin domain-containing protein 5 (TXNDC5, ERP46) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGCGACGGGCCCCCCTTCATCAGCCGAACTGTGTCACGCGCGCTGCTA
Internal bar code:GGTCGTGGTGCTTTGAAATGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2214
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGCGTCTCTGGAGTGTTT
Suggested primer 2:GTTCGCAGCTGCAACTCAAA