Insertion junction: CLIP2.020145_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.020145
Chromosome:chromosome 12
Location:8217764
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g551700 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTACACCATGATTCCGATTGCGTAAGCCACACTGTCGTCGTCCAGGATC
Internal bar code:CGCAGTACGGAGAGCCGCGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1429
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:ACCAACTACACCACGACGAC
Suggested primer 2:TCGGATGTGTATCTGCTGGC