Insertion junction: CLIP2.020153_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.020153
Chromosome:chromosome 12
Location:9433861
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g541150 (1 of 3) PF03942 - DTW domain (DTW) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGAACCAATCCCGTAAGGAAACAGTCGCGCTGCAAAGAGAAACTGTAG
Internal bar code:GACCAGTGTGCCAGCACAAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1068
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TGATTATTCGGGAGGGCACG
Suggested primer 2:GTCACCTGCAGCATGAGAGT