Insertion junction: CLIP2.020164_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.020164
Chromosome:chromosome 11
Location:313237
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467567 UBQ1 Ubiquitin; (1 of 1) PTHR10666:SF150 - POLYUBIQUITIN 3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGCAGCGCTGCCAAGGCAGCGATGGCAGGTTATGATGGCACATAGGT
Internal bar code:ATGTGATAAAATGGCTGGTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2938
LEAP-Seq percent confirming:80.9524
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTAGCCGTTTCTGTCACA
Suggested primer 2:ACGTCGTTCAAGCGTAACCT