Insertion junction: CLIP2.020164_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.020164
Chromosome:chromosome 11
Location:313239
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467567 UBQ1 Ubiquitin; (1 of 1) PTHR10666:SF150 - POLYUBIQUITIN 3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTACTCCGTTTCAGAACTTGAACAATGGCCCTTCTGACTCCCCGCAAA
Internal bar code:ATGTGATAAAATGGCTGGTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:977
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTCGTTCAAGCGTAACCT
Suggested primer 2:GGGTAGCCGTTTCTGTCACA