Insertion junction: CLIP2.020174_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.020174
Chromosome:chromosome 14
Location:2632577
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g625350 MAE17 MATE efflux family protein; (1 of 3) PTHR11206:SF95 - MULTI ANTIMICROBIAL EXTRUSION FAMILY PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCCCACCACAGCAGCACCCCAAGCACCCCCCCCCACACACACACACAC
Internal bar code:AGGAGTTAGACGTCTCGAAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:650
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCTAACTCCCCTGCTAGT
Suggested primer 2:GGCGGTATTGTATGAGCGGA