Insertion junction: CLIP2.020178_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.020178
Chromosome:chromosome 16
Location:7262986
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g677765 (1 of 4) PF00207 - Alpha-2-macroglobulin family (A2M) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCATGCGGAAGGTTAGCACCGGCGGCAGACAGCGTGTGGTGCACTTCAGA
Internal bar code:TCTGGTAGCCTTCTTGGCTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4007
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAGTAGTATTTGCGGCGG
Suggested primer 2:GTGCTAAGCTTGCGAGATGC