Insertion junction: CLIP2.020180_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.020180
Chromosome:chromosome 13
Location:3643858
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g588100 CYN19C,ROC2,CYN5,CYN19-3 (1 of 1) K09565 - peptidyl-prolyl isomerase F (cyclophilin D) (PPIF); Cyclophilin 19-3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGTAAATACCAGCCCAAACTAAACCAAAGCCAACGAAAACGGGAGTGC
Internal bar code:ATCCTAGACTGCCGGCACCCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:88
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AGCACAAGCCATGGTAGCAT
Suggested primer 2:ATCTGCTGGTGCTTGAGGAC