Insertion junction: CLIP2.020180_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.020180
Chromosome:chromosome 13
Location:3643863
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g588100 CYN19C,ROC2,CYN5,CYN19-3 (1 of 1) K09565 - peptidyl-prolyl isomerase F (cyclophilin D) (PPIF); Cyclophilin 19-3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAACCCCCCCCCCTCCCTCACCCGCGGGCAGCTCGCCGCAGTCCGCCAC
Internal bar code:ATCCTAGACTGCCGGCACCCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1218
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTGCTGGTGCTTGAGGAC
Suggested primer 2:AGCACAAGCCATGGTAGCAT