Insertion junction: CLIP2.020183_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.020183
Chromosome:chromosome 7
Location:3554690
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g336550 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTAAAGCCAACTAACAACGATCACCGGCTGCAGGCAGGCAGTATAGAG
Internal bar code:AAGGTTCGTCCGTACAGCCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4432
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:78
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:AACGCGCTTCACTCACAAAC
Suggested primer 2:CGTCCCAAACAACTGGCAAG