Insertion junction: CLIP2.020187_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.020187
Chromosome:chromosome 6
Location:3855412
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00179360

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGATGTGCTAGGGAAGCGGTATCAGGAATGCTTTGAGGTGTTGCAAAC
Internal bar code:CTTAGTTGCATTTCATCACTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3191
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:88
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:88

Suggested primers for confirmation by PCR

Suggested primer 1:GACACGCACTCAAGGACAGA
Suggested primer 2:TACGTGTCGGTGCAAAGGAA