Insertion junction: CLIP2.020189_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.020189
Chromosome:chromosome 3
Location:5105750
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g180550 FPN2,NTD5 (1 of 3) K01081 - 5'-nucleotidase (E3.1.3.5); Flagellar Associated 5'-nucleotidase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTGGGCAACTTCGTGTGCGACGTGTGGCGCAAGGCAGCCAACGCCCAG
Internal bar code:CCGCAGTGAGTACACCAATTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2884
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGTGGCTATGCAAATCGC
Suggested primer 2:AGAGAGGGGGTCGGATGAAA