Insertion junction: CLIP2.020197_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.020197
Chromosome:chromosome 2
Location:5271223
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g112600 (1 of 3) PTHR13780//PTHR13780:SF49 - AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGGGGCGGTGGCAGCAGCTGGCTTGGCGGGGGCAGGGGCAGCGGCGGG
Internal bar code:GCAGTTGTAGTAAAAGTGAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1348
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AAATGTTGGTCGCCACAAGC
Suggested primer 2:CGTCTCTCACCTGATCTCGC