Insertion junction: CLIP2.020204_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.020204
Chromosome:chromosome 7
Location:4877040
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g346350 (1 of 2) PTHR10174//PTHR10174:SF113 - RETINALDEHYDE BINDING PROTEIN-RELATED // RETINALDEHYDE-BINDING PROTEIN 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTGCAGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
Internal bar code:AACCGATGGTAGGAGGTAGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1090
LEAP-Seq percent confirming:76.1905
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCGGTGTGTGTTCGTGTG
Suggested primer 2:ATCCCTTTCAAGCCTCCAGC