Insertion junction: CLIP2.020205_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.020205
Chromosome:chromosome 3
Location:3016989
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g163500 EX1,CGLD21 Executer 1, chloroplastic; (1 of 1) PTHR33917//PTHR33917:SF1 - FAMILY NOT NAMED // PROTEIN EXECUTER 1, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGAGGTCGGGGGCAAGACCGGGTTCACCTGGGGCCAGGGACTATTTGGC
Internal bar code:CTAGTGCTGTCGTCACATTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1273
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TATTTTCCAGTCGCCCACCC
Suggested primer 2:AGGTGCGTTGCAATAGCTCT