Insertion junction: CLIP2.020221_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.020221
Chromosome:chromosome 7
Location:3317188
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g334750 PPP30 (1 of 3) PTHR12320//PTHR12320:SF15 - PROTEIN PHOSPHATASE 2C // SUBFAMILY NOT NAMED; Phosphoprotein phosphatase 2C-related intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAATCGGTGCCGTCCGTTATGTGGCCTCCAGCCGGAGCGAAGCATGCGG
Internal bar code:GTTAAAAGTATGAAGTTCCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1295
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTTCCAGGCCCTGAACTG
Suggested primer 2:TAGTGTGCAGCTGACAGGTG